Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11741 and 11742 are separated by 665 nucleotides11742 and 11743 are separated by 537 nucleotides11743 and 11744 are separated by 65 nucleotides11744 and 11745 are separated by 134 nucleotides mRNA_3373: 11741 - K00390 cysH phosphoadenosine phosphosulfate reductase, at 523,671 to 524,664 11741 mRNA_3374: 11742 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 525,330 to 527,850 11742 mRNA_3375: 11743 - Hypothetical Protein, at 528,388 to 528,831 11743 mRNA_3376: 11744 - K12864 CTNNBL1 beta-catenin-like protein 1, at 528,897 to 531,251 11744 mRNA_3377: 11745 - KOG1516 Carboxylesterase and related proteins, at 531,386 to 533,428 11745
Group Condition mRNA_3373 mRNA_3374 mRNA_3375 mRNA_3376 mRNA_3377
11741 11742 11743 11744 11745
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -1.3 -1.5 -0.5 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 -0.1 -0.0 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -0.2 +0.0 -0.6 +0.0
growth on ricinoleic acid YNB Glucose -1.7 -0.1 +0.2 -0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.8 -0.4 -0.3 +0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -1.5 -0.4 +0.3 -0.0 +0.3
auxotrophy YNB Glucose -1.2 -0.1 +0.2 -0.1 +0.3
growth on oleic acid YNB Glucose -1.3 -0.1 +0.1 +0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.8 +0.0 +0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.4 +0.1 -0.1 -0.1 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 +0.2 -0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.3 +0.1 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 +0.2 +0.2 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.1 -0.0 +0.2
growth on ypd YPD +0.2 -0.5 +0.4 -0.0 -0.1
auxotrophy Dropout Complete +0.0 +0.1 +0.0 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 +0.5 +0.3 +0.5 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.0 +0.5 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.5 +0.1 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 +0.2 -0.1 +0.4 +0.1
remove
mRNA_3373
plot
remove
mRNA_3374
plot
remove
mRNA_3375
remove
mRNA_3376
plot
remove
mRNA_3377
plot