Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11746 and 11747 are separated by 1021 nucleotides11747 and 11748 are separated by 329 nucleotides11748 and 11749 are separated by 620 nucleotides11749 and 11750 are separated by 267 nucleotides mRNA_3378: 11746 - KOG1516 Carboxylesterase and related proteins, at 533,955 to 535,983 11746 mRNA_3379: 11747 - Hypothetical Protein, at 537,005 to 537,944 11747 mRNA_3380: 11748 - KOG1650 Predicted K+/H+-antiporter, at 538,274 to 541,877 11748 mRNA_3381: 11749 - K06027 NSF vesicle-fusing ATPase, at 542,498 to 545,831 11749 mRNA_3382: 11750 - HMMPfam-Vaculolar membrane protein-PF12400,PRINTS-Proline rich extensin signature-PR01217, at 546,099 to 548,480 11750
Group Condition mRNA_3378 mRNA_3379 mRNA_3380 mRNA_3381 mRNA_3382
11746 11747 11748 11749 11750
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.2 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.2 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.2 -0.3 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 -0.0 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 +0.0 N.D. +0.1
growth on ypd YPD -0.1 -0.1 -0.0 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.1 +0.1 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -0.2 N.D. +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.2 -0.0 N.D. +0.3
growth on oleic acid YNB Oleic Acid +0.0 -0.0 -0.1 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.4 +0.2 N.D. +0.2
auxotrophy YNB Glucose -0.3 +0.1 -0.1 N.D. +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 -0.2 N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.1 +0.2 -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.1 -0.3 N.D. +0.3
auxotrophy Dropout Complete -0.0 +0.1 -0.1 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.2 -0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.0 -0.0 N.D. +0.5
growth on oleic acid YNB Glucose +0.4 -0.0 +0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.4 -0.1 N.D. +0.1
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