Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11748 and 11749 are separated by 620 nucleotides11749 and 11750 are separated by 267 nucleotides11750 and 11751 are separated by 264 nucleotides11751 and 11752 are separated by 1125 nucleotides mRNA_3380: 11748 - KOG1650 Predicted K+/H+-antiporter, at 538,274 to 541,877 11748 mRNA_3381: 11749 - K06027 NSF vesicle-fusing ATPase, at 542,498 to 545,831 11749 mRNA_3382: 11750 - HMMPfam-Vaculolar membrane protein-PF12400,PRINTS-Proline rich extensin signature-PR01217, at 546,099 to 548,480 11750 mRNA_3383: 11751 - HMMPfam-BSD domain-PF03909,ProSiteProfiles-BSD domain profile.-PS50858,SMART-domain in transcription factors and synapse-associated proteins-SM00751,SUPERFAMILY--SSF140383, at 548,745 to 549,848 11751 mRNA_3384: 11752 - K00963 UGP2, galU, galF UTP--glucose-1-phosphate uridylyltransferase, at 550,974 to 553,438 11752
Group Condition mRNA_3380 mRNA_3381 mRNA_3382 mRNA_3383 mRNA_3384
11748 11749 11750 11751 11752
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -0.1 -4.2 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. +0.6 -2.5 N.D.
growth on ricinoleic acid YNB Glucose -0.1 N.D. +0.1 -2.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.2 -1.5 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.3 -1.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. +0.3 -1.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.3 -1.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.5 -1.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 N.D. +0.3 -0.8 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.1 -0.4 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. +0.1 -0.1 N.D.
auxotrophy Dropout Complete -0.1 N.D. +0.4 -0.2 N.D.
growth on oleic acid YNB Glucose +0.0 N.D. +0.2 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. +0.2 +0.1 N.D.
growth on ypd YPD -0.0 N.D. +0.2 +0.5 N.D.
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.2 +1.1 N.D.
auxotrophy YNB Glucose -0.1 N.D. +0.6 +1.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. +0.1 +1.7 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.1 +2.8 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +0.3 +2.8 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.2 +3.4 N.D.
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