Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11749 and 11750 are separated by 267 nucleotides11750 and 11751 are separated by 264 nucleotides11751 and 11752 are separated by 1125 nucleotides11752 and 11753 are separated by 1016 nucleotides mRNA_3381: 11749 - K06027 NSF vesicle-fusing ATPase, at 542,498 to 545,831 11749 mRNA_3382: 11750 - HMMPfam-Vaculolar membrane protein-PF12400,PRINTS-Proline rich extensin signature-PR01217, at 546,099 to 548,480 11750 mRNA_3383: 11751 - HMMPfam-BSD domain-PF03909,ProSiteProfiles-BSD domain profile.-PS50858,SMART-domain in transcription factors and synapse-associated proteins-SM00751,SUPERFAMILY--SSF140383, at 548,745 to 549,848 11751 mRNA_3384: 11752 - K00963 UGP2, galU, galF UTP--glucose-1-phosphate uridylyltransferase, at 550,974 to 553,438 11752 mRNA_3385: 11753 - HMMPfam-Gamma interferon inducible lysosomal thiol reductase (GILT)-PF03227, at 554,455 to 555,770 11753
Group Condition mRNA_3381 mRNA_3382 mRNA_3383 mRNA_3384 mRNA_3385
11749 11750 11751 11752 11753
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -4.2 N.D. -0.7
growth on ricinoleic acid YNB Glucose N.D. +0.1 -2.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -1.5 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine N.D. +0.6 -2.5 N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.3 -1.6 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 -1.3 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 -1.3 N.D. +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 -1.2 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.4 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 -0.8 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.1 N.D. +0.1
growth on oleic acid YNB Glucose N.D. +0.2 +0.1 N.D. -0.0
auxotrophy Dropout Complete N.D. +0.4 -0.2 N.D. +0.2
growth on ypd YPD N.D. +0.2 +0.5 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 +0.1 N.D. +0.3
growth on oleic acid YNB Oleic Acid N.D. +0.2 +1.1 N.D. +0.0
auxotrophy YNB Glucose N.D. +0.6 +1.0 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +1.7 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +2.8 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +2.8 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +3.4 N.D. +0.4
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