Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11758 and 11759 are separated by 679 nucleotides11759 and 11760 are separated by 347 nucleotides11760 and 11761 are separated by 434 nucleotides11761 and 11762 are separated by 106 nucleotides mRNA_3390: 11758 - K06617 E2.4.1.82 raffinose synthase, at 564,328 to 568,075 11758 mRNA_3391: 11759 - Hypothetical Protein, at 568,755 to 569,736 11759 mRNA_3392: 11760 - HMMPfam-Caffeine-induced death protein 2-PF09774, at 570,084 to 570,935 11760 mRNA_3393: 11761 - KOG3662 Cell division control protein/predicted DNA repair exonuclease, at 571,370 to 574,049 11761 mRNA_3394: 11762 - HMMPfam-UreF-PF01730, at 574,156 to 575,292 11762
Group Condition mRNA_3390 mRNA_3391 mRNA_3392 mRNA_3393 mRNA_3394
11758 11759 11760 11761 11762
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.4 +0.0 -0.9 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.0 +0.4 -0.8 -0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.0 +0.5 -0.6 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 -0.5 -0.1 +0.2
auxotrophy Dropout Complete +0.1 -0.2 +0.4 -0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 +0.3 -0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 -0.1 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.3 +0.6 -0.5 -0.5
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.1 +0.3 -0.7 -0.1
growth on ypd YPD +0.5 +0.6 -0.9 -0.2 +0.1
auxotrophy YNB Glucose +0.1 +0.1 +0.9 -0.7 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 +0.8 -0.6 -0.1
growth on oleic acid YNB Glucose +0.1 +0.3 +0.3 -0.5 +0.1
growth on oleic acid YNB Oleic Acid -0.1 +0.3 +0.4 -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 +0.3 -0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.3 +0.5 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.2 +0.6 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.4 +0.3 -0.1 +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.3 +0.2 +0.3 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.2 +0.9 -0.0 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.3 +0.7 -0.1 +0.7
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