Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11760 and 11761 are separated by 434 nucleotides11761 and 11762 are separated by 106 nucleotides11762 and 11763 are separated by 157 nucleotides11763 and 11764 are separated by 562 nucleotides mRNA_3392: 11760 - HMMPfam-Caffeine-induced death protein 2-PF09774, at 570,084 to 570,935 11760 mRNA_3393: 11761 - KOG3662 Cell division control protein/predicted DNA repair exonuclease, at 571,370 to 574,049 11761 mRNA_3394: 11762 - HMMPfam-UreF-PF01730, at 574,156 to 575,292 11762 mRNA_3395: 11763 - K07566 tsaC, rimN, SUA5 L-threonylcarbamoyladenylate synthase, at 575,450 to 577,006 11763 mRNA_3396: 11764 - HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 577,569 to 578,953 11764
Group Condition mRNA_3392 mRNA_3393 mRNA_3394 mRNA_3395 mRNA_3396
11760 11761 11762 11763 11764
growth on ypd YPD -0.9 -0.2 +0.1 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.9 -0.3 N.D. +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.8 -0.1 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.1 +0.2 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.7 -0.1 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 +0.1 N.D. +0.0
growth on ricinoleic acid YNB Glucose +0.5 -0.6 -0.2 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.5 -0.2 N.D. +0.3
auxotrophy Dropout Complete +0.4 -0.4 -0.2 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.6 -0.5 -0.5 N.D. +0.5
auxotrophy YNB Glucose +0.9 -0.7 +0.0 N.D. -0.0
growth on oleic acid YNB Glucose +0.3 -0.5 +0.1 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine +0.8 -0.6 -0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.2 +0.2 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.4 -0.2 +0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.0 +0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.1 +0.5 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.0 +0.0 N.D. +0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.3 +0.5 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.1 +0.7 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.9 -0.0 +0.5 N.D. +0.1
remove
mRNA_3392
plot
remove
mRNA_3393
plot
remove
mRNA_3394
remove
mRNA_3395
plot
remove
mRNA_3396
plot