Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11761 and 11762 are separated by 106 nucleotides11762 and 11763 are separated by 157 nucleotides11763 and 11764 are separated by 562 nucleotides11764 and 11765 are separated by 325 nucleotides mRNA_3393: 11761 - KOG3662 Cell division control protein/predicted DNA repair exonuclease, at 571,370 to 574,049 11761 mRNA_3394: 11762 - HMMPfam-UreF-PF01730, at 574,156 to 575,292 11762 mRNA_3395: 11763 - K07566 tsaC, rimN, SUA5 L-threonylcarbamoyladenylate synthase, at 575,450 to 577,006 11763 mRNA_3396: 11764 - HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 577,569 to 578,953 11764 mRNA_3397: 11765 - K13370 HSD17B8 17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+), at 579,279 to 580,457 11765
Group Condition mRNA_3393 mRNA_3394 mRNA_3395 mRNA_3396 mRNA_3397
11761 11762 11763 11764 11765
growth on ricinoleic acid YNB Glucose -0.6 -0.2 N.D. +0.1 -0.2
auxotrophy YNB Glucose -0.7 +0.0 N.D. -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.1 N.D. +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.3 N.D. +0.4 +0.1
auxotrophy Dropout Complete -0.4 -0.2 N.D. +0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.1 N.D. +0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.1 N.D. +0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 N.D. +0.0 -0.2
growth on oleic acid YNB Glucose -0.5 +0.1 N.D. +0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 N.D. +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.2 N.D. +0.3 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.5 N.D. +0.5 +0.5
growth on oleic acid YNB Oleic Acid -0.2 +0.1 N.D. +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 N.D. +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.0 N.D. +0.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 N.D. -0.2 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.5 N.D. +0.1 -0.0
growth on ypd YPD -0.2 +0.1 N.D. +0.2 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.5 N.D. +0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.5 N.D. +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.7 N.D. -0.0 +0.3
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