Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11763 and 11764 are separated by 562 nucleotides11764 and 11765 are separated by 325 nucleotides11765 and 11766 are separated by 396 nucleotides11766 and 11767 are separated by 459 nucleotides mRNA_3395: 11763 - K07566 tsaC, rimN, SUA5 L-threonylcarbamoyladenylate synthase, at 575,450 to 577,006 11763 mRNA_3396: 11764 - HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 577,569 to 578,953 11764 mRNA_3397: 11765 - K13370 HSD17B8 17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+), at 579,279 to 580,457 11765 mRNA_3398: 11766 - Hypothetical Protein, at 580,854 to 581,831 11766 mRNA_3399: 11767 - KOG0733 Nuclear AAA ATPase (VCP subfamily), at 582,291 to 585,718 11767
Group Condition mRNA_3395 mRNA_3396 mRNA_3397 mRNA_3398 mRNA_3399
11763 11764 11765 11766 11767
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 +0.4 -0.8 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.2 -0.1 -0.1
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.2 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.1 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 -0.2 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 -0.0 -0.0 +0.0
auxotrophy YNB Glucose N.D. -0.0 -0.1 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 -0.4 +0.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 +0.1 +0.3 +0.1
auxotrophy Dropout Complete N.D. +0.1 -0.0 +0.3 +0.2
growth on oleic acid YNB Glucose N.D. +0.3 +0.0 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.0 +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +0.0 +0.3 +0.2
growth on oleic acid YNB Oleic Acid N.D. +0.1 +0.0 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 +0.3 +0.7 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.5 +0.5 -0.0 +0.1
growth on ypd YPD N.D. +0.2 +0.4 +0.3 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 +0.3 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 +0.3 +0.8 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 +0.1 +0.7 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 -0.1 +1.1 +0.0
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