Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11764 and 11765 are separated by 325 nucleotides11765 and 11766 are separated by 396 nucleotides11766 and 11767 are separated by 459 nucleotides11767 and 11768 are separated by 115 nucleotides mRNA_3396: 11764 - HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 577,569 to 578,953 11764 mRNA_3397: 11765 - K13370 HSD17B8 17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+), at 579,279 to 580,457 11765 mRNA_3398: 11766 - Hypothetical Protein, at 580,854 to 581,831 11766 mRNA_3399: 11767 - KOG0733 Nuclear AAA ATPase (VCP subfamily), at 582,291 to 585,718 11767 mRNA_3400: 11768 - KOG3345 Uncharacterized conserved protein, at 585,834 to 587,522 11768
Group Condition mRNA_3396 mRNA_3397 mRNA_3398 mRNA_3399 mRNA_3400
11764 11765 11766 11767 11768
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.4 -0.8 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 -0.0 +0.0 -0.3
growth on ricinoleic acid YNB Glucose +0.1 -0.2 -0.1 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 -0.1 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 +0.2 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.0 +0.2 +0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 -0.0 -0.0 +0.2
auxotrophy Dropout Complete +0.1 -0.0 +0.3 +0.2 -0.4
auxotrophy YNB Glucose -0.0 -0.1 +0.1 +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.1 +0.3 +0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.1 +0.0 +0.4 +0.2 -0.2
growth on oleic acid YNB Glucose +0.3 +0.0 +0.1 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.0 +0.3 +0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.4 +0.0 +0.2 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.3 +0.7 +0.1 -0.1
growth on ypd YPD +0.2 +0.4 +0.3 +0.2 +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.3 +0.4 +0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.5 +0.5 -0.0 +0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.1 +0.7 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.1 +1.1 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.3 +0.8 +0.1 +0.3
remove
mRNA_3396
plot
remove
mRNA_3397
plot
remove
mRNA_3398
remove
mRNA_3399
plot
remove
mRNA_3400
plot