Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11773 and 11774 are separated by 632 nucleotides11774 and 11775 are separated by 224 nucleotides11775 and 11776 are separated by 705 nucleotides11776 and 11777 are separated by 339 nucleotides mRNA_3405: 11773 - K17922 SNX8, MVP1 sorting nexin-8, at 10,068 to 11,831 11773 mRNA_3406: 11774 - Hypothetical Protein, at 12,464 to 13,384 11774 mRNA_3407: 11775 - KOG0498 K+-channel ERG and related proteins, contain PAS/PAC sensor domain, at 13,609 to 17,494 11775 mRNA_3408: 11776 - K00012 UGDH, ugd UDPglucose 6-dehydrogenase, at 18,200 to 20,454 11776 mRNA_3409: 11777 - K05658 ABCB1, CD243 ATP-binding cassette, subfamily B (MDR/TAP), member 1, at 20,794 to 26,649 11777
Group Condition mRNA_3405 mRNA_3406 mRNA_3407 mRNA_3408 mRNA_3409
11773 11774 11775 11776 11777
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.9 -0.0 -0.5 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -0.1 -0.5 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.7 +0.1 -0.7 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.1 -0.4 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1 -0.6 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.0 -0.2 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.2 -1.0 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -0.7 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 -0.4 N.D. +0.0
growth on oleic acid YNB Glucose +0.2 -0.0 -0.6 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.1 -0.9 N.D. -0.0
auxotrophy Dropout Complete +0.5 -0.1 -0.4 N.D. -0.0
auxotrophy YNB Glucose +0.9 -0.2 -0.5 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.2 -0.2 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 -0.1 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.1 +0.5 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.1 -0.4 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.0 -0.3 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.2 N.D. +0.2
growth on ypd YPD +1.1 -0.0 -0.0 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +1.0 +0.0 +0.0 N.D. +0.2
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