Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11774 and 11775 are separated by 224 nucleotides11775 and 11776 are separated by 705 nucleotides11776 and 11777 are separated by 339 nucleotides11777 and 11778 are separated by 540 nucleotides mRNA_3406: 11774 - Hypothetical Protein, at 12,464 to 13,384 11774 mRNA_3407: 11775 - KOG0498 K+-channel ERG and related proteins, contain PAS/PAC sensor domain, at 13,609 to 17,494 11775 mRNA_3408: 11776 - K00012 UGDH, ugd UDPglucose 6-dehydrogenase, at 18,200 to 20,454 11776 mRNA_3409: 11777 - K05658 ABCB1, CD243 ATP-binding cassette, subfamily B (MDR/TAP), member 1, at 20,794 to 26,649 11777 mRNA_3410: 11778 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 27,190 to 28,187 11778
Group Condition mRNA_3406 mRNA_3407 mRNA_3408 mRNA_3409 mRNA_3410
11774 11775 11776 11777 11778
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.5 N.D. -0.1 -0.9
growth on ricinoleic acid YNB Glucose -0.2 -0.7 N.D. +0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.4 N.D. +0.0 -0.6
growth on oleic acid YNB Glucose -0.0 -0.6 N.D. +0.0 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -1.0 N.D. +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 N.D. +0.0 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.4 N.D. -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.6 N.D. +0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.3 N.D. +0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.5 N.D. +0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.5 N.D. -0.4 -0.4
auxotrophy YNB Glucose -0.2 -0.5 N.D. -0.1 +0.6
growth on oleic acid YNB Oleic Acid +0.1 -0.7 N.D. +0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.9 N.D. -0.0 +0.9
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 N.D. +0.1 +0.5
auxotrophy Dropout Complete -0.1 -0.4 N.D. -0.0 +0.7
growth on ypd YPD -0.0 -0.0 N.D. +0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 N.D. +0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 N.D. +0.1 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 N.D. +0.2 +0.4
remove
mRNA_3406
plot
remove
mRNA_3407
plot
remove
mRNA_3408
remove
mRNA_3409
plot
remove
mRNA_3410
plot