Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11775 and 11776 are separated by 705 nucleotides11776 and 11777 are separated by 339 nucleotides11777 and 11778 are separated by 540 nucleotides11778 and 11779 are separated by 1726 nucleotides mRNA_3407: 11775 - KOG0498 K+-channel ERG and related proteins, contain PAS/PAC sensor domain, at 13,609 to 17,494 11775 mRNA_3408: 11776 - K00012 UGDH, ugd UDPglucose 6-dehydrogenase, at 18,200 to 20,454 11776 mRNA_3409: 11777 - K05658 ABCB1, CD243 ATP-binding cassette, subfamily B (MDR/TAP), member 1, at 20,794 to 26,649 11777 mRNA_3410: 11778 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 27,190 to 28,187 11778 mRNA_3411: 11779 - SUPERFAMILY--SSF81296, at 29,914 to 31,700 11779
Group Condition mRNA_3407 mRNA_3408 mRNA_3409 mRNA_3410 mRNA_3411
11775 11776 11777 11778 11779
facs on lipid accumulation Sorted No BODIPY Gate -0.2 N.D. +0.0 -0.5 -1.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 N.D. -0.4 -0.4 -1.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. -0.1 -0.9 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. +0.0 -0.2 -1.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 N.D. +0.2 +0.1 -0.4
growth on oleic acid YNB Glucose -0.6 N.D. +0.0 -0.3 -0.1
growth on ricinoleic acid YNB Glucose -0.7 N.D. +0.1 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. +0.0 -0.6 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.1 -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 N.D. +0.0 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. -0.1 +0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.7 N.D. +0.2 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. +0.0 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.1 +0.5 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.9 N.D. -0.0 +0.9 +0.0
growth on ypd YPD -0.0 N.D. +0.2 +0.3 -0.4
auxotrophy YNB Glucose -0.5 N.D. -0.1 +0.6 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. +0.1 +0.5 -0.0
auxotrophy Dropout Complete -0.4 N.D. -0.0 +0.7 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.2 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.2 +0.4 +0.3
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