Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11778 and 11779 are separated by 1726 nucleotides11779 and 11780 are separated by 547 nucleotides11780 and 11781 are separated by 341 nucleotides11781 and 11782 are separated by 490 nucleotides mRNA_3410: 11778 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 27,190 to 28,187 11778 mRNA_3411: 11779 - SUPERFAMILY--SSF81296, at 29,914 to 31,700 11779 mRNA_3412: 11780 - KOG0548 Molecular co-chaperone STI1, at 32,248 to 34,426 11780 mRNA_3413: 11781 - K00622 nat arylamine N-acetyltransferase, at 34,768 to 35,867 11781 mRNA_3414: 11782 - Hypothetical Protein, at 36,358 to 36,969 11782
Group Condition mRNA_3410 mRNA_3411 mRNA_3412 mRNA_3413 mRNA_3414
11778 11779 11780 11781 11782
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 -0.4 N.D. -0.6 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -1.8 N.D. +0.3 -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 N.D. +0.1 -1.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -1.4 N.D. +0.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -1.1 N.D. -0.1 +0.2
growth on oleic acid YNB Glucose -0.3 -0.1 N.D. +0.6 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +0.1 N.D. -0.2 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.3 N.D. -0.2 -0.6
growth on oleic acid YNB Oleic Acid +0.3 +0.1 N.D. +0.4 -0.8
growth on ypd YPD +0.3 -0.4 N.D. -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.4 N.D. +0.6 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.3 N.D. +0.4 -0.3
growth on ricinoleic acid YNB Glucose -0.5 +0.0 N.D. +0.8 -0.3
auxotrophy Dropout Complete +0.7 +0.1 N.D. -0.2 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 N.D. -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.0 N.D. +0.3 -0.4
auxotrophy YNB Glucose +0.6 +0.1 N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 N.D. -0.2 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.9 +0.0 N.D. -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.0 N.D. +0.0 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.6 N.D. +0.5 +0.5
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