Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11784 and 11785 are separated by 233 nucleotides11785 and 11786 are separated by 470 nucleotides11786 and 11787 are separated by 1100 nucleotides11787 and 11788 are separated by 390 nucleotides mRNA_3416: 11784 - Hypothetical Protein, at 42,396 to 43,510 11784 mRNA_3417: 11785 - Hypothetical Protein, at 43,744 to 46,912 11785 mRNA_3418: 11786 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 47,383 to 48,909 11786 mRNA_3419: 11787 - K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase, at 50,010 to 53,314 11787 mRNA_3420: 11788 - HMMPfam-ATP dependent DNA ligase domain-PF01068,HMMPfam-DNA ligase N terminus-PF04675,ProSiteProfiles-ATP-dependent DNA ligase family profile.-PS50160,SUPERFAMILY--SSF56091, at 53,705 to 57,912 11788
Group Condition mRNA_3416 mRNA_3417 mRNA_3418 mRNA_3419 mRNA_3420
11784 11785 11786 11787 11788
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.1 -1.4 -1.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 -0.6 -1.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.0 +0.3 -2.2 -0.4
growth on ypd YPD -0.5 -0.2 -0.9 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.1 -0.1 -1.3 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -1.8 +0.1 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 +0.3 -1.5 +0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 -0.3 -0.6 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 -0.1 -0.9 -0.3
growth on ricinoleic acid YNB Glucose +0.0 -0.1 +0.3 -0.7 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 -0.1 -0.5 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +0.0 -0.4 +0.3
growth on oleic acid YNB Glucose +0.2 +0.0 -0.4 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 +0.0 -0.9 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.4 -0.3 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.0 +0.0 -0.3 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.1 -0.3 +0.4 -0.1
auxotrophy Dropout Complete +0.3 +0.0 -0.2 -0.2 +0.5
growth on oleic acid YNB Oleic Acid +0.1 -0.0 +0.7 -0.7 +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 +0.5 -0.0 +0.3
auxotrophy YNB Glucose +0.1 +0.2 +0.5 -0.2 +0.1
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