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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11793 and 11794 are separated by 79 nucleotides
11794 and 11795 are separated by 268 nucleotides
11795 and 11796 are separated by 702 nucleotides
11796 and 11797 are separated by 679 nucleotides
mRNA_3425: 11793 - K00789 metK S-adenosylmethionine synthetase, at 67,905 to 69,207
11793
mRNA_3426: 11794 - K08498 STX6 syntaxin 6, at 69,287 to 70,405
11794
mRNA_3427: 11795 - HMMPfam-Domain of unknown function (DUF1996)-PF09362, at 70,674 to 72,222
11795
mRNA_3428: 11796 - Hypothetical Protein, at 72,925 to 76,768
11796
mRNA_3429: 11797 - K06636 SMC1 structural maintenance of chromosome 1, at 77,448 to 78,675
11797
Group
Condition
mRNA
_3425
mRNA
_3426
mRNA
_3427
mRNA
_3428
mRNA
_3429
11793
11794
11795
11796
11797
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.6
-0.7
+0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.1
-0.1
-0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
+0.4
-0.5
-0.1
N.D.
growth on oleic acid
YNB Glucose
-0.3
-0.1
+0.2
-0.4
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.2
-0.2
-0.5
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.2
-0.4
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.1
-0.6
+0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
+0.6
-0.2
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.6
+0.0
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.2
-0.5
+0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.4
-0.3
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.6
-0.3
-0.4
N.D.
auxotrophy
Dropout Complete
-0.3
+0.5
+0.0
-0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.3
-0.1
-0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.3
-0.1
-0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
+0.2
-0.1
-0.4
N.D.
growth on ricinoleic acid
YNB Glucose
-0.2
+0.8
-0.2
-0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.2
+0.1
+0.2
-0.2
N.D.
auxotrophy
YNB Glucose
-0.1
+0.6
-0.0
-0.0
N.D.
growth on ypd
YPD
+0.4
+0.3
+0.5
-0.8
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.5
+0.1
+0.5
N.D.
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