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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11794 and 11795 are separated by 268 nucleotides
11795 and 11796 are separated by 702 nucleotides
11796 and 11797 are separated by 679 nucleotides
11797 and 11798 are separated by 3153 nucleotides
mRNA_3426: 11794 - K08498 STX6 syntaxin 6, at 69,287 to 70,405
11794
mRNA_3427: 11795 - HMMPfam-Domain of unknown function (DUF1996)-PF09362, at 70,674 to 72,222
11795
mRNA_3428: 11796 - Hypothetical Protein, at 72,925 to 76,768
11796
mRNA_3429: 11797 - K06636 SMC1 structural maintenance of chromosome 1, at 77,448 to 78,675
11797
mRNA_3430: 11798 - Hypothetical Protein, at 81,829 to 82,404
11798
Group
Condition
mRNA
_3426
mRNA
_3427
mRNA
_3428
mRNA
_3429
mRNA
_3430
11794
11795
11796
11797
11798
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
-0.7
+0.3
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
+0.0
+0.0
N.D.
-0.0
growth on ypd
YPD
+0.3
+0.5
-0.8
N.D.
-0.6
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.2
-0.5
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.3
-0.3
N.D.
-0.0
growth on oleic acid
YNB Glucose
-0.1
+0.2
-0.4
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.6
+0.1
N.D.
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.1
-0.0
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.5
+0.2
N.D.
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.4
-0.1
N.D.
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.1
-0.1
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.6
-0.3
-0.4
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
-0.2
N.D.
-0.2
auxotrophy
Dropout Complete
+0.5
+0.0
-0.3
N.D.
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
-0.4
N.D.
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
-0.2
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.5
-0.1
N.D.
+0.6
auxotrophy
YNB Glucose
+0.6
-0.0
-0.0
N.D.
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.6
-0.2
-0.3
N.D.
+0.4
growth on ricinoleic acid
YNB Glucose
+0.8
-0.2
-0.1
N.D.
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
+0.1
+0.5
N.D.
+0.1
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