Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11795 and 11796 are separated by 702 nucleotides11796 and 11797 are separated by 679 nucleotides11797 and 11798 are separated by 3153 nucleotides11798 and 11799 are separated by 266 nucleotides mRNA_3427: 11795 - HMMPfam-Domain of unknown function (DUF1996)-PF09362, at 70,674 to 72,222 11795 mRNA_3428: 11796 - Hypothetical Protein, at 72,925 to 76,768 11796 mRNA_3429: 11797 - K06636 SMC1 structural maintenance of chromosome 1, at 77,448 to 78,675 11797 mRNA_3430: 11798 - Hypothetical Protein, at 81,829 to 82,404 11798 mRNA_3431: 11799 - K11155 DGAT1 diacylglycerol O-acyltransferase 1, at 82,671 to 85,458 11799
Group Condition mRNA_3427 mRNA_3428 mRNA_3429 mRNA_3430 mRNA_3431
11795 11796 11797 11798 11799
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 N.D. +0.2 -0.2
growth on ypd YPD +0.5 -0.8 N.D. -0.6 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 N.D. -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.1 N.D. +0.6 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.4 N.D. +0.0 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4 N.D. +0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.3 N.D. -0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 +0.3 N.D. -0.0 +0.2
growth on oleic acid YNB Oleic Acid +0.2 -0.2 N.D. -0.2 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 N.D. +0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.5 N.D. +0.1 +0.5
auxotrophy Dropout Complete +0.0 -0.3 N.D. -0.1 +0.4
growth on oleic acid YNB Glucose +0.2 -0.4 N.D. -0.1 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 N.D. +0.4 +0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.1 N.D. +0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.5 N.D. +0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +0.1 N.D. +0.4 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 N.D. +0.2 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.0 N.D. -0.0 +0.2
auxotrophy YNB Glucose -0.0 -0.0 N.D. +0.0 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 +0.2 N.D. +0.4 +0.3
remove
mRNA_3427
plot
remove
mRNA_3428
plot
remove
mRNA_3429
remove
mRNA_3430
plot
remove
mRNA_3431
plot