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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11796 and 11797 are separated by 679 nucleotides
11797 and 11798 are separated by 3153 nucleotides
11798 and 11799 are separated by 266 nucleotides
11799 and 11800 are separated by 1217 nucleotides
mRNA_3428: 11796 - Hypothetical Protein, at 72,925 to 76,768
11796
mRNA_3429: 11797 - K06636 SMC1 structural maintenance of chromosome 1, at 77,448 to 78,675
11797
mRNA_3430: 11798 - Hypothetical Protein, at 81,829 to 82,404
11798
mRNA_3431: 11799 - K11155 DGAT1 diacylglycerol O-acyltransferase 1, at 82,671 to 85,458
11799
mRNA_3432: 11800 - BLAST RecF/RecN/SMC protein [Sistotremastrum niveocremeum H..., at 86,676 to 87,359
11800
Group
Condition
mRNA
_3428
mRNA
_3429
mRNA
_3430
mRNA
_3431
mRNA
_3432
11796
11797
11798
11799
11800
growth on ypd
YPD
-0.8
N.D.
-0.6
+0.3
-0.1
auxotrophy
Dropout Complete
-0.3
N.D.
-0.1
+0.4
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
N.D.
+0.4
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
-0.2
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
N.D.
-0.2
+0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
N.D.
+0.0
+0.4
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.5
N.D.
+0.1
-0.5
-0.2
growth on oleic acid
YNB Glucose
-0.4
N.D.
-0.1
+0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
-0.0
+0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
+0.2
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
N.D.
-0.0
+0.2
-0.0
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
+0.3
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
N.D.
+0.1
+0.5
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
+0.6
-0.3
+0.1
auxotrophy
YNB Glucose
-0.0
N.D.
+0.0
+0.4
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
N.D.
+0.2
+0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
+0.2
-0.0
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
N.D.
+0.4
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
N.D.
-0.0
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
+0.4
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
N.D.
+0.4
+0.3
-0.1
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