Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11798 and 11799 are separated by 266 nucleotides11799 and 11800 are separated by 1217 nucleotides11800 and 11801 are separated by 871 nucleotides11801 and 11802 are separated by 288 nucleotides mRNA_3430: 11798 - Hypothetical Protein, at 81,829 to 82,404 11798 mRNA_3431: 11799 - K11155 DGAT1 diacylglycerol O-acyltransferase 1, at 82,671 to 85,458 11799 mRNA_3432: 11800 - BLAST RecF/RecN/SMC protein [Sistotremastrum niveocremeum H..., at 86,676 to 87,359 11800 mRNA_3433: 11801 - HMMPfam-Rtr1/RPAP2 family-PF04181,HMMPfam-VMA21-like domain-PF09446,ProSiteProfiles-RTR1-type zinc finger.-PS51479, at 88,231 to 90,113 11801 mRNA_3434: 11802 - K00237 SDHD, SDH4 succinate dehydrogenase (ubiquinone) membrane anchor subunit, at 90,402 to 91,512 11802
Group Condition mRNA_3430 mRNA_3431 mRNA_3432 mRNA_3433 mRNA_3434
11798 11799 11800 11801 11802
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.5 -0.2 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.1 -0.0 N.D.
growth on ypd YPD -0.6 +0.3 -0.1 +0.0 N.D.
auxotrophy Dropout Complete -0.1 +0.4 -0.4 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.2 -0.2 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.4 -0.3 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.2 +0.2 +0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.2 +0.0 +0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.2 -0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.2 -0.0 +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 +0.3 -0.3 N.D.
growth on oleic acid YNB Glucose -0.1 +0.3 +0.1 -0.1 N.D.
auxotrophy YNB Glucose +0.0 +0.4 -0.2 +0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.3 +0.1 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.4 -0.0 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.3 +0.1 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.4 -0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.3 -0.1 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.5 +0.0 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.4 +0.0 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.1 +0.1 +0.3 N.D.
remove
mRNA_3430
plot
remove
mRNA_3431
plot
remove
mRNA_3432
remove
mRNA_3433
plot
remove
mRNA_3434
plot