Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11800 and 11801 are separated by 871 nucleotides11801 and 11802 are separated by 288 nucleotides11802 and 11803 are separated by 473 nucleotides11803 and 11804 are separated by 389 nucleotides mRNA_3432: 11800 - BLAST RecF/RecN/SMC protein [Sistotremastrum niveocremeum H..., at 86,676 to 87,359 11800 mRNA_3433: 11801 - HMMPfam-Rtr1/RPAP2 family-PF04181,HMMPfam-VMA21-like domain-PF09446,ProSiteProfiles-RTR1-type zinc finger.-PS51479, at 88,231 to 90,113 11801 mRNA_3434: 11802 - K00237 SDHD, SDH4 succinate dehydrogenase (ubiquinone) membrane anchor subunit, at 90,402 to 91,512 11802 mRNA_3435: 11803 - K12614 DDX6, RCK, DHH1 ATP-dependent RNA helicase DDX6/DHH1, at 91,986 to 94,017 11803 mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94,407 to 97,285 11804
Group Condition mRNA_3432 mRNA_3433 mRNA_3434 mRNA_3435 mRNA_3436
11800 11801 11802 11803 11804
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.0 N.D. -0.9 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.0 N.D. -0.8 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.1 N.D. -0.4 -0.3
auxotrophy Dropout Complete -0.4 +0.0 N.D. -0.3 -0.1
growth on ricinoleic acid YNB Glucose -0.1 +0.1 N.D. -0.5 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.0 N.D. -0.4 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 N.D. -0.8 -0.3
growth on ypd YPD -0.1 +0.0 N.D. -0.5 -0.1
auxotrophy YNB Glucose -0.2 +0.0 N.D. -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 N.D. -0.5 +0.0
growth on oleic acid YNB Glucose +0.1 -0.1 N.D. -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.0 N.D. -0.4 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 N.D. -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.3 N.D. -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 N.D. -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 N.D. -0.1 -0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.3 N.D. -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.0 N.D. -0.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.3 N.D. +0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 N.D. +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.0 N.D. -0.0 +0.3
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