Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11803 and 11804 are separated by 389 nucleotides11804 and 11805 are separated by 147 nucleotides11805 and 11806 are separated by 146 nucleotides11806 and 11807 are separated by 698 nucleotides mRNA_3435: 11803 - K12614 DDX6, RCK, DHH1 ATP-dependent RNA helicase DDX6/DHH1, at 91,986 to 94,017 11803 mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94,407 to 97,285 11804 mRNA_3437: 11805 - K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3, at 97,433 to 99,630 11805 mRNA_3438: 11806 - KOG1162 Predicted small molecule transporter, at 99,777 to 103,344 11806 mRNA_3439: 11807 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 104,043 to 108,423 11807
Group Condition mRNA_3435 mRNA_3436 mRNA_3437 mRNA_3438 mRNA_3439
11803 11804 11805 11806 11807
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.3 +0.6 +0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.3 +0.3 +0.2 -0.6
growth on ypd YPD -0.5 -0.1 +0.3 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.0 +0.3 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 -0.0 +0.2 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 +0.0 +0.3 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.9 -0.3 +0.4 +0.3 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 +0.0 +0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.0 +0.6 -0.4 +0.5
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.0 +0.6 -0.1 +0.3
auxotrophy YNB Glucose -0.4 -0.1 +0.6 -0.1 +0.7
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 +0.3 -0.7 +1.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 +0.0 +0.1 +0.3
growth on oleic acid YNB Glucose -0.5 -0.1 +0.5 -0.1 +0.8
auxotrophy Dropout Complete -0.3 -0.1 +0.7 -0.3 +0.8
growth on ricinoleic acid YNB Glucose -0.5 -0.2 +0.4 -0.1 +1.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.3 +0.5 +0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.3 -0.3 +0.7 +0.3
growth on oleic acid YNB Oleic Acid -0.2 -0.1 +0.7 +0.1 +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 +0.5 +0.2 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 +0.6 -0.2 +1.1
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