Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11804 and 11805 are separated by 147 nucleotides11805 and 11806 are separated by 146 nucleotides11806 and 11807 are separated by 698 nucleotides11807 and 11808 are separated by 1578 nucleotides mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94,407 to 97,285 11804 mRNA_3437: 11805 - K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3, at 97,433 to 99,630 11805 mRNA_3438: 11806 - KOG1162 Predicted small molecule transporter, at 99,777 to 103,344 11806 mRNA_3439: 11807 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 104,043 to 108,423 11807 mRNA_3440: 11808 - SUPERFAMILY--SSF56112, at 110,002 to 112,287 11808
Group Condition mRNA_3436 mRNA_3437 mRNA_3438 mRNA_3439 mRNA_3440
11804 11805 11806 11807 11808
growth on ypd YPD -0.1 +0.3 -0.1 -0.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.6 +0.0 -0.6 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.3 +0.2 -0.6 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.3 -0.0 -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 -0.7 +1.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.1 +0.3 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.0 +0.1 +0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.6 -0.1 +0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.6 -0.4 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.2 +0.2 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.3 -0.1 +0.2 +0.4
growth on oleic acid YNB Glucose -0.1 +0.5 -0.1 +0.8 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.5 +0.1 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.4 +0.3 +0.4 +0.1
auxotrophy Dropout Complete -0.1 +0.7 -0.3 +0.8 -0.0
auxotrophy YNB Glucose -0.1 +0.6 -0.1 +0.7 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.3 +0.7 +0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.6 -0.2 +1.1 -0.0
growth on oleic acid YNB Oleic Acid -0.1 +0.7 +0.1 +0.5 +0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.4 -0.1 +1.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.5 +0.2 +0.5 +0.2
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