Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11804 and 11805 are separated by 147 nucleotides
11805 and 11806 are separated by 146 nucleotides
11806 and 11807 are separated by 698 nucleotides
11807 and 11808 are separated by 1578 nucleotides
mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94,407 to 97,285
11804
mRNA_3437: 11805 - K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3, at 97,433 to 99,630
11805
mRNA_3438: 11806 - KOG1162 Predicted small molecule transporter, at 99,777 to 103,344
11806
mRNA_3439: 11807 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 104,043 to 108,423
11807
mRNA_3440: 11808 - SUPERFAMILY--SSF56112, at 110,002 to 112,287
11808
Group
Condition
mRNA
_3436
mRNA
_3437
mRNA
_3438
mRNA
_3439
mRNA
_3440
11804
11805
11806
11807
11808
growth on ypd
YPD
-0.1
+0.3
-0.1
-0.4
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.6
+0.0
-0.6
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+0.3
+0.2
-0.6
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.3
-0.0
-0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.3
-0.7
+1.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
+0.1
+0.3
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.0
+0.1
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.6
-0.1
+0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.6
-0.4
+0.5
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.2
+0.2
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
+0.3
-0.1
+0.2
+0.4
growth on oleic acid
YNB Glucose
-0.1
+0.5
-0.1
+0.8
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.5
+0.1
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.4
+0.3
+0.4
+0.1
auxotrophy
Dropout Complete
-0.1
+0.7
-0.3
+0.8
-0.0
auxotrophy
YNB Glucose
-0.1
+0.6
-0.1
+0.7
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.3
+0.7
+0.3
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.6
-0.2
+1.1
-0.0
growth on oleic acid
YNB Oleic Acid
-0.1
+0.7
+0.1
+0.5
+0.1
growth on ricinoleic acid
YNB Glucose
-0.2
+0.4
-0.1
+1.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.5
+0.2
+0.5
+0.2
remove
mRNA_3436
plot
remove
mRNA_3437
plot
remove
mRNA_3438
remove
mRNA_3439
plot
remove
mRNA_3440
plot