Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11805 and 11806 are separated by 146 nucleotides11806 and 11807 are separated by 698 nucleotides11807 and 11808 are separated by 1578 nucleotides11808 and 11809 are separated by 209 nucleotides mRNA_3437: 11805 - K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3, at 97,433 to 99,630 11805 mRNA_3438: 11806 - KOG1162 Predicted small molecule transporter, at 99,777 to 103,344 11806 mRNA_3439: 11807 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 104,043 to 108,423 11807 mRNA_3440: 11808 - SUPERFAMILY--SSF56112, at 110,002 to 112,287 11808 mRNA_3441: 11809 - K00729 ALG5 dolichyl-phosphate beta-glucosyltransferase, at 112,497 to 113,807 11809
Group Condition mRNA_3437 mRNA_3438 mRNA_3439 mRNA_3440 mRNA_3441
11805 11806 11807 11808 11809
growth on ypd YPD +0.3 -0.1 -0.4 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.0 -0.6 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.0 -0.2 -0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.2 -0.6 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.5 +0.1 -0.0 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 +0.3 +0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.7 +0.3 +0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 +0.3 +0.2 +0.0
growth on oleic acid YNB Glucose +0.5 -0.1 +0.8 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.6 -0.4 +0.5 -0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.1 +0.3 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 +0.4 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 +0.2 +0.4 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.7 +1.0 +0.0 +0.4
growth on oleic acid YNB Oleic Acid +0.7 +0.1 +0.5 +0.1 -0.1
auxotrophy Dropout Complete +0.7 -0.3 +0.8 -0.0 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.2 +0.5 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.3 +0.4 +0.1 +0.2
auxotrophy YNB Glucose +0.6 -0.1 +0.7 +0.0 +0.5
growth on ricinoleic acid YNB Glucose +0.4 -0.1 +1.2 +0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.2 +1.1 -0.0 +0.3
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