Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11807 and 11808 are separated by 1578 nucleotides
11808 and 11809 are separated by 209 nucleotides
11809 and 11810 are separated by 123 nucleotides
11810 and 11811 are separated by 1166 nucleotides
mRNA_3439: 11807 - KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins, at 104,043 to 108,423
11807
mRNA_3440: 11808 - SUPERFAMILY--SSF56112, at 110,002 to 112,287
11808
mRNA_3441: 11809 - K00729 ALG5 dolichyl-phosphate beta-glucosyltransferase, at 112,497 to 113,807
11809
mRNA_3442: 11810 - SUPERFAMILY--SSF52047, at 113,931 to 115,281
11810
mRNA_3443: 11811 - K06694 PSMD10 26S proteasome non-ATPase regulatory subunit 10, at 116,448 to 118,253
11811
Group
Condition
mRNA
_3439
mRNA
_3440
mRNA
_3441
mRNA
_3442
mRNA
_3443
11807
11808
11809
11810
11811
growth on ypd
YPD
-0.4
-0.3
-0.2
-0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.1
+0.0
+0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.0
-0.2
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.0
+0.2
-0.2
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
+0.2
+0.2
+0.5
+0.2
growth on oleic acid
YNB Oleic Acid
+0.5
+0.1
-0.1
-0.0
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.1
+0.0
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.0
+0.2
-0.0
+0.1
growth on oleic acid
YNB Glucose
+0.8
-0.3
-0.1
+0.4
+0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.5
+0.2
+0.1
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.2
+0.3
+0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.2
+0.0
+0.4
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.2
-0.3
+0.4
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.1
+0.2
-0.1
+0.5
growth on ricinoleic acid
YNB Glucose
+1.2
+0.1
+0.0
-0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+1.0
+0.0
+0.4
+0.3
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.1
-0.0
+0.3
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.4
+0.3
-0.2
+0.7
auxotrophy
Dropout Complete
+0.8
-0.0
+0.3
+0.2
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.5
-0.0
+0.2
+0.5
+0.3
auxotrophy
YNB Glucose
+0.7
+0.0
+0.5
+0.3
+0.4
remove
mRNA_3439
plot
remove
mRNA_3440
plot
remove
mRNA_3441
remove
mRNA_3442
plot
remove
mRNA_3443
plot