Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11808 and 11809 are separated by 209 nucleotides11809 and 11810 are separated by 123 nucleotides11810 and 11811 are separated by 1166 nucleotides11811 and 11812 are separated by 222 nucleotides mRNA_3440: 11808 - SUPERFAMILY--SSF56112, at 110,002 to 112,287 11808 mRNA_3441: 11809 - K00729 ALG5 dolichyl-phosphate beta-glucosyltransferase, at 112,497 to 113,807 11809 mRNA_3442: 11810 - SUPERFAMILY--SSF52047, at 113,931 to 115,281 11810 mRNA_3443: 11811 - K06694 PSMD10 26S proteasome non-ATPase regulatory subunit 10, at 116,448 to 118,253 11811 mRNA_3444: 11812 - Hypothetical Protein, at 118,476 to 119,519 11812
Group Condition mRNA_3440 mRNA_3441 mRNA_3442 mRNA_3443 mRNA_3444
11808 11809 11810 11811 11812
growth on ypd YPD -0.3 -0.2 -0.1 -0.3 -0.2
growth on oleic acid YNB Glucose -0.3 -0.1 +0.4 +0.0 -0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.1 -0.0 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 +0.0 -0.0 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 -0.2 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 -0.2 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.0 +0.1 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.2 -0.0 +0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.3 +0.2 +0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.3 -0.2 +0.0 +0.3
growth on ricinoleic acid YNB Glucose +0.1 +0.0 -0.0 -0.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.0 +0.4 +0.3 -0.5 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 +0.2 +0.0 +0.3
auxotrophy Dropout Complete -0.0 +0.3 +0.2 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.3 -0.2 +0.7 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 +0.5 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 +0.4 +0.1 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.3 +0.4 +0.4 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.2 +0.5 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 -0.1 +0.5 +0.3
auxotrophy YNB Glucose +0.0 +0.5 +0.3 +0.4 -0.0
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