Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11810 and 11811 are separated by 1166 nucleotides11811 and 11812 are separated by 222 nucleotides11812 and 11813 are separated by 843 nucleotides11813 and 11814 are separated by 653 nucleotides mRNA_3442: 11810 - SUPERFAMILY--SSF52047, at 113,931 to 115,281 11810 mRNA_3443: 11811 - K06694 PSMD10 26S proteasome non-ATPase regulatory subunit 10, at 116,448 to 118,253 11811 mRNA_3444: 11812 - Hypothetical Protein, at 118,476 to 119,519 11812 mRNA_3445: 11813 - HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041, at 120,363 to 121,884 11813 mRNA_3446: 11814 - K07393 ECM4 putative glutathione S-transferase, at 122,538 to 123,846 11814
Group Condition mRNA_3442 mRNA_3443 mRNA_3444 mRNA_3445 mRNA_3446
11810 11811 11812 11813 11814
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 +0.1 -0.8 +0.2
growth on ypd YPD -0.1 -0.3 -0.2 +0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.2 -0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.5 +0.3 -0.7 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 +0.2 -0.2 -0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.4 +0.2 -0.7 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.1 +0.2 -0.5 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.5 +0.3 +0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.0 +0.3 -0.3 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 +0.4 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.1 +0.2 -0.0 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.0 +0.4 -0.3 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 +0.3 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.7 -0.3 +0.5 +0.1
growth on oleic acid YNB Oleic Acid -0.0 +0.2 +0.0 +0.3 +0.3
growth on oleic acid YNB Glucose +0.4 +0.0 -0.1 +0.6 -0.1
auxotrophy Dropout Complete +0.2 +0.3 +0.0 +0.7 -0.1
growth on ricinoleic acid YNB Glucose -0.0 -0.1 +0.5 +0.7 +0.1
auxotrophy YNB Glucose +0.3 +0.4 -0.0 +0.8 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 -0.1 +0.8 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.3 +0.0 +0.6 +0.6
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