Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11813 and 11814 are separated by 653 nucleotides11814 and 11815 are separated by 377 nucleotides11815 and 11816 are separated by 258 nucleotides11816 and 11817 are separated by 82 nucleotides mRNA_3445: 11813 - HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041, at 120,363 to 121,884 11813 mRNA_3446: 11814 - K07393 ECM4 putative glutathione S-transferase, at 122,538 to 123,846 11814 mRNA_3447: 11815 - HMMPfam-AhpC/TSA antioxidant enzyme-PF13911,SUPERFAMILY--SSF52833, at 124,224 to 125,009 11815 mRNA_3448: 11816 - HMMPfam-Peptidase M50B-like-PF13398, at 125,268 to 126,548 11816 mRNA_3449: 11817 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 126,631 to 128,651 11817
Group Condition mRNA_3445 mRNA_3446 mRNA_3447 mRNA_3448 mRNA_3449
11813 11814 11815 11816 11817
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.1 N.D. -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.1 N.D. +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.1 N.D. -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.3 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 N.D. -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 +0.2 N.D. +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 N.D. -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.3 N.D. +0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.2 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.3 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.1 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.2 N.D. +0.2 N.D.
growth on ypd YPD +0.1 +0.0 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.5 N.D. +0.3 N.D.
auxotrophy Dropout Complete +0.7 -0.1 N.D. -0.0 N.D.
growth on oleic acid YNB Glucose +0.6 -0.1 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.7 +0.1 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.3 +0.3 N.D. +0.5 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.6 +0.6 N.D. +0.1 N.D.
auxotrophy YNB Glucose +0.8 +0.3 N.D. +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.8 +0.6 N.D. +0.2 N.D.
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