Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11814 and 11815 are separated by 377 nucleotides11815 and 11816 are separated by 258 nucleotides11816 and 11817 are separated by 82 nucleotides11817 and 11818 are separated by 762 nucleotides mRNA_3446: 11814 - K07393 ECM4 putative glutathione S-transferase, at 122,538 to 123,846 11814 mRNA_3447: 11815 - HMMPfam-AhpC/TSA antioxidant enzyme-PF13911,SUPERFAMILY--SSF52833, at 124,224 to 125,009 11815 mRNA_3448: 11816 - HMMPfam-Peptidase M50B-like-PF13398, at 125,268 to 126,548 11816 mRNA_3449: 11817 - HMMPfam-Integral peroxisomal membrane peroxin-PF06398, at 126,631 to 128,651 11817 mRNA_3450: 11818 - K20131 RABGEF1 Rab5 GDP/GTP exchange factor, at 129,414 to 132,360 11818
Group Condition mRNA_3446 mRNA_3447 mRNA_3448 mRNA_3449 mRNA_3450
11814 11815 11816 11817 11818
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.2 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.6 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.4 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.2 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. +0.1 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.2 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. -0.2 N.D. +0.0
auxotrophy Dropout Complete -0.1 N.D. -0.0 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. +0.0 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.0 N.D. -0.2
auxotrophy YNB Glucose +0.3 N.D. +0.3 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. -0.0 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.2 N.D. -0.2
growth on oleic acid YNB Glucose -0.1 N.D. +0.1 N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.2 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 N.D. +0.2 N.D. +0.1
growth on ypd YPD +0.0 N.D. +0.3 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.6 N.D. +0.1 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 N.D. +0.3 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.6 N.D. +0.2 N.D. +0.2
growth on oleic acid YNB Oleic Acid +0.3 N.D. +0.5 N.D. +0.2
remove
mRNA_3446
plot		 remove
mRNA_3447
plot		 remove
mRNA_3448		 remove
mRNA_3449
plot		 remove
mRNA_3450
plot