Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11821 and 11822 are separated by 96 nucleotides
11822 and 11823 are separated by 93 nucleotides
11823 and 11824 are separated by 242 nucleotides
11824 and 11825 are separated by 269 nucleotides
mRNA_3453: 11821 - KOG2959 Transcriptional regulator, at 138,350 to 139,548
11821
mRNA_3454: 11822 - SUPERFAMILY--SSF52047, at 139,645 to 140,934
11822
mRNA_3455: 11823 - K03424 tatD TatD DNase family protein, at 141,028 to 142,309
11823
mRNA_3456: 11824 - HMMPfam-Family of unknown function (DUF500)-PF04366, at 142,552 to 143,804
11824
mRNA_3457: 11825 - KOG1843 Uncharacterized conserved protein, at 144,074 to 145,634
11825
Group
Condition
mRNA
_3453
mRNA
_3454
mRNA
_3455
mRNA
_3456
mRNA
_3457
11821
11822
11823
11824
11825
auxotrophy
YNB Glucose
-0.1
+0.0
-0.1
-0.9
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.2
-0.6
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
+0.5
-0.4
-0.2
-0.3
auxotrophy
Dropout Complete
-0.3
-0.2
-0.2
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.0
-0.4
-0.7
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
-0.2
-0.3
+0.4
+0.1
growth on ypd
YPD
-1.4
+0.2
-0.1
+0.4
+0.1
growth on ricinoleic acid
YNB Glucose
-0.5
+0.2
-0.3
-0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.2
-0.4
-0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.2
-0.2
-0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-0.1
+0.5
+0.3
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
+0.2
+0.1
+0.3
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.1
-0.2
+0.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.3
-0.4
-0.1
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.1
-0.3
+0.8
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.1
-0.4
+0.8
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
-0.0
+0.3
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.0
+0.1
+0.5
growth on oleic acid
YNB Glucose
+0.5
+0.0
+0.1
-0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.3
+0.0
+0.5
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.2
-0.2
+0.7
+0.3
remove
mRNA_3453
plot
remove
mRNA_3454
plot
remove
mRNA_3455
remove
mRNA_3456
plot
remove
mRNA_3457
plot