Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11825 and 11826 are separated by 117 nucleotides
11826 and 11827 are separated by 158 nucleotides
11827 and 11828 are separated by 156 nucleotides
11828 and 11829 are separated by 390 nucleotides
mRNA_3457: 11825 - KOG1843 Uncharacterized conserved protein, at 144,074 to 145,634
11825
mRNA_3458: 11826 - K03857 PIGA, GPI3 phosphatidylinositol glycan, class A, at 145,752 to 147,635
11826
mRNA_3459: 11827 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 147,794 to 151,467
11827
mRNA_3460: 11828 - HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153, at 151,624 to 153,827
11828
mRNA_3461: 11829 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 154,218 to 156,143
11829
Group
Condition
mRNA
_3457
mRNA
_3458
mRNA
_3459
mRNA
_3460
mRNA
_3461
11825
11826
11827
11828
11829
auxotrophy
YNB Glucose 75mM Methionine
-0.5
N.D.
-0.2
-0.0
-0.4
auxotrophy
YNB Glucose
-0.4
N.D.
+0.2
-0.1
-0.1
growth on ypd
YPD
+0.1
N.D.
-0.2
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.4
N.D.
-0.1
+0.0
+0.0
auxotrophy
Dropout Complete
-0.2
N.D.
+0.1
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
-0.1
-0.0
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
+0.0
+0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
N.D.
+0.0
-0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
-0.1
-0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
N.D.
-0.0
-0.0
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
-0.0
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
+0.2
N.D.
+0.0
-0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
+0.0
+0.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
N.D.
+0.1
+0.3
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
N.D.
+0.1
+0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
+0.0
+0.2
-0.1
growth on oleic acid
YNB Oleic Acid
+0.5
N.D.
+0.0
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
+0.1
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
N.D.
+0.1
+0.1
+0.0
growth on oleic acid
YNB Glucose
+0.3
N.D.
-0.0
-0.0
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
N.D.
-0.0
-0.2
+0.5
remove
mRNA_3457
plot
remove
mRNA_3458
plot
remove
mRNA_3459
remove
mRNA_3460
plot
remove
mRNA_3461
plot