Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11825 and 11826 are separated by 117 nucleotides11826 and 11827 are separated by 158 nucleotides11827 and 11828 are separated by 156 nucleotides11828 and 11829 are separated by 390 nucleotides mRNA_3457: 11825 - KOG1843 Uncharacterized conserved protein, at 144,074 to 145,634 11825 mRNA_3458: 11826 - K03857 PIGA, GPI3 phosphatidylinositol glycan, class A, at 145,752 to 147,635 11826 mRNA_3459: 11827 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 147,794 to 151,467 11827 mRNA_3460: 11828 - HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153, at 151,624 to 153,827 11828 mRNA_3461: 11829 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 154,218 to 156,143 11829
Group Condition mRNA_3457 mRNA_3458 mRNA_3459 mRNA_3460 mRNA_3461
11825 11826 11827 11828 11829
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. -0.2 -0.0 -0.4
auxotrophy YNB Glucose -0.4 N.D. +0.2 -0.1 -0.1
growth on ypd YPD +0.1 N.D. -0.2 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. -0.1 +0.0 +0.0
auxotrophy Dropout Complete -0.2 N.D. +0.1 -0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. -0.1 -0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. +0.0 +0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.0 -0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. -0.1 -0.1 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. -0.0 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. -0.0 +0.1 -0.1
growth on ricinoleic acid YNB Glucose +0.2 N.D. +0.0 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.0 +0.2 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. +0.1 +0.3 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 N.D. +0.1 +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.0 +0.2 -0.1
growth on oleic acid YNB Oleic Acid +0.5 N.D. +0.0 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.1 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. +0.1 +0.1 +0.0
growth on oleic acid YNB Glucose +0.3 N.D. -0.0 -0.0 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.5 N.D. -0.0 -0.2 +0.5
remove
mRNA_3457
plot
remove
mRNA_3458
plot
remove
mRNA_3459
remove
mRNA_3460
plot
remove
mRNA_3461
plot