Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11826 and 11827 are separated by 158 nucleotides11827 and 11828 are separated by 156 nucleotides11828 and 11829 are separated by 390 nucleotides11829 and 11830 are separated by 517 nucleotides mRNA_3458: 11826 - K03857 PIGA, GPI3 phosphatidylinositol glycan, class A, at 145,752 to 147,635 11826 mRNA_3459: 11827 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 147,794 to 151,467 11827 mRNA_3460: 11828 - HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153, at 151,624 to 153,827 11828 mRNA_3461: 11829 - KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains, at 154,218 to 156,143 11829 mRNA_3462: 11830 - K17978 NUM1 nuclear migration protein NUM1, at 156,661 to 162,747 11830
Group Condition mRNA_3458 mRNA_3459 mRNA_3460 mRNA_3461 mRNA_3462
11826 11827 11828 11829 11830
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.0 +0.1 -0.1 -1.0
growth on ricinoleic acid YNB Glucose N.D. +0.0 -0.0 -0.0 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.2 +0.2 -1.3
auxotrophy Dropout Complete N.D. +0.1 -0.0 -0.2 -0.7
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 +0.0 +0.0 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 -0.0 +0.4 -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.2 +0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.0 -0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 +0.2 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.0 -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.0 -0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 +0.2 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.1 +0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 +0.2 +0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 +0.3 -0.5 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 -0.2 +0.5 -0.0
growth on oleic acid YNB Oleic Acid N.D. +0.0 -0.0 -0.1 +0.4
auxotrophy YNB Glucose N.D. +0.2 -0.1 -0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.1 +0.1 +0.4
growth on oleic acid YNB Glucose N.D. -0.0 -0.0 +0.4 +0.1
growth on ypd YPD N.D. -0.2 -0.2 -0.2 +1.4
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