Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11833 and 11834 are separated by 219 nucleotides11834 and 11835 are separated by 2608 nucleotides11835 and 11836 are separated by 541 nucleotides11836 and 11837 are separated by 114 nucleotides mRNA_3465: 11833 - KOG1176 Acyl-CoA synthetase, at 166,819 to 169,091 11833 mRNA_3466: 11834 - HMMPfam-Sds3-like-PF08598, at 169,311 to 170,947 11834 mRNA_3467: 11835 - KOG4503 Uncharacterized conserved membrane protein, at 173,556 to 174,836 11835 mRNA_3468: 11836 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 175,378 to 177,362 11836 mRNA_3469: 11837 - K07512 MECR, NRBF1 mitochondrial trans-2-enoyl-CoA reductase, at 177,477 to 179,110 11837
Group Condition mRNA_3465 mRNA_3466 mRNA_3467 mRNA_3468 mRNA_3469
11833 11834 11835 11836 11837
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.6 N.D. +0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.6 N.D. +0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5 N.D. -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.4 N.D. +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 N.D. +0.0 -0.2
growth on oleic acid YNB Glucose +0.1 -0.5 N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.5 N.D. +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.4 N.D. +0.2 +0.0
growth on ricinoleic acid YNB Glucose -0.3 -0.4 N.D. +0.1 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.3 N.D. +0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.2 N.D. -0.0 -0.0
growth on ypd YPD -0.1 -0.3 N.D. +0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.3 N.D. +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.2 N.D. +0.2 -0.2
growth on oleic acid YNB Oleic Acid +0.2 -0.1 N.D. +0.1 -0.1
auxotrophy Dropout Complete -0.1 +0.1 N.D. +0.4 -0.3
auxotrophy YNB Glucose +0.1 -0.2 N.D. +0.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.0 N.D. +0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.2 N.D. +0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.3 N.D. +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.3 N.D. +0.4 +0.3
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