Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11835 and 11836 are separated by 541 nucleotides11836 and 11837 are separated by 114 nucleotides11837 and 11838 are separated by 219 nucleotides11838 and 11839 are separated by 310 nucleotides mRNA_3467: 11835 - KOG4503 Uncharacterized conserved membrane protein, at 173,556 to 174,836 11835 mRNA_3468: 11836 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 175,378 to 177,362 11836 mRNA_3469: 11837 - K07512 MECR, NRBF1 mitochondrial trans-2-enoyl-CoA reductase, at 177,477 to 179,110 11837 mRNA_3470: 11838 - KOG1492 C3H1-type Zn-finger protein, at 179,330 to 181,535 11838 mRNA_3471: 11839 - Interpro Transcription-silencing protein, cryptic loci regulator Clr2 Transcription-silencing protein Clr2, at 181,846 to 184,835 11839
Group Condition mRNA_3467 mRNA_3468 mRNA_3469 mRNA_3470 mRNA_3471
11835 11836 11837 11838 11839
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 -0.2 -0.9 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.3 -0.8 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.2 -0.7 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.1 -1.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 -0.4 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -0.2 -0.4 -0.2
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.1 -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.6 +0.0 -0.0
growth on oleic acid YNB Glucose N.D. +0.1 -0.1 -0.3 -0.0
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 -0.2 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 -0.1 +0.1 +0.2
auxotrophy Dropout Complete N.D. +0.4 -0.3 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.2 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.1 -0.1 +0.4
growth on ypd YPD N.D. +0.3 +0.1 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.0 +0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 +0.3 +0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 -0.0 +0.8 -0.1
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.4 +0.1 +0.1
auxotrophy YNB Glucose N.D. +0.4 -0.0 +0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 -0.0 +0.5 +0.1
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