Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11844 and 11845 are separated by 993 nucleotides11845 and 11846 are separated by 394 nucleotides11846 and 11847 are separated by 160 nucleotides11847 and 11848 are separated by 196 nucleotides mRNA_3476: 11844 - K01915 glnA, GLUL glutamine synthetase, at 198,470 to 200,585 11844 mRNA_3477: 11845 - K07088 K07088 uncharacterized protein, at 201,579 to 204,327 11845 mRNA_3478: 11846 - SUPERFAMILY--SSF56112, at 204,722 to 206,830 11846 mRNA_3479: 11847 - SUPERFAMILY--SSF46934, at 206,991 to 209,346 11847 mRNA_3480: 11848 - K02180 BUB3 cell cycle arrest protein BUB3, at 209,543 to 211,018 11848
Group Condition mRNA_3476 mRNA_3477 mRNA_3478 mRNA_3479 mRNA_3480
11844 11845 11846 11847 11848
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.4 +0.4 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -1.0 -0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.8 -0.0 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 -0.1 -0.2 N.D.
growth on oleic acid YNB Glucose N.D. -0.3 -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.6 +0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.5 +0.2 +0.0 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.1 -0.2 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.2 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.6 +1.1 -0.4 N.D.
auxotrophy YNB Glucose N.D. +0.3 -0.0 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 +0.2 -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.4 +0.1 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.2 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 -0.0 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 +0.4 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 +0.1 +0.2 N.D.
auxotrophy Dropout Complete N.D. +0.3 +0.1 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.7 -0.2 +0.1 N.D.
growth on ypd YPD N.D. -0.2 +0.5 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.7 +0.3 -0.1 N.D.
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