Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11847 and 11848 are separated by 196 nucleotides11848 and 11849 are separated by 214 nucleotides11849 and 11850 are separated by 354 nucleotides11850 and 11851 are separated by 117 nucleotides mRNA_3479: 11847 - SUPERFAMILY--SSF46934, at 206,991 to 209,346 11847 mRNA_3480: 11848 - K02180 BUB3 cell cycle arrest protein BUB3, at 209,543 to 211,018 11848 mRNA_3481: 11849 - K01752 E4.3.1.17, sdaA, sdaB, tdcG L-serine dehydratase, at 211,233 to 213,567 11849 mRNA_3482: 11850 - K03861 PIGP, GPI19, DSCR5 phosphatidylinositol glycan, class P, at 213,922 to 215,101 11850 mRNA_3483: 11851 - KOG0683 Glutamine synthetase, at 215,219 to 215,380 11851
Group Condition mRNA_3479 mRNA_3480 mRNA_3481 mRNA_3482 mRNA_3483
11847 11848 11849 11850 11851
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. -0.3 -0.9 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.2 -0.2 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. -0.1 -0.3 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.4 -0.2 -0.3
growth on ypd YPD +0.3 N.D. +0.1 -0.1 -0.8
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.1 +0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. -0.1 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.1 -0.4 +0.1
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.0 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -0.1 +0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.0 +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.0 -0.3 +0.2
growth on oleic acid YNB Glucose +0.0 N.D. +0.4 -0.1 -0.2
auxotrophy Dropout Complete -0.0 N.D. -0.0 +0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. -0.1 +0.2 +0.2
auxotrophy YNB Glucose -0.1 N.D. +0.2 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.2 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. +0.0 +0.6 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.0 +0.5 +0.1
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