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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
11851 and 11852 are separated by 406 nucleotides
11852 and 11853 are separated by 506 nucleotides
11853 and 11854 are separated by 331 nucleotides
11854 and 11855 are separated by 571 nucleotides
mRNA_3483: 11851 - KOG0683 Glutamine synthetase, at 215,219 to 215,380
11851
mRNA_3484: 11852 - Hypothetical Protein, at 215,787 to 216,323
11852
mRNA_3485: 11853 - HMMPfam-Neugrin-PF06413, at 216,830 to 218,374
11853
mRNA_3486: 11854 - K04563 CDC28, CDC2 cyclin-dependent kinase, at 218,706 to 220,470
11854
mRNA_3487: 11855 - Hypothetical Protein, at 221,042 to 223,920
11855
Group
Condition
mRNA
_3483
mRNA
_3484
mRNA
_3485
mRNA
_3486
mRNA
_3487
11851
11852
11853
11854
11855
ypd buoyancy
40 hrs Low Buoyancy
-0.6
-1.1
N.D.
N.D.
-0.2
auxotrophy
Dropout Complete
-0.1
-0.9
N.D.
N.D.
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.7
N.D.
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.6
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.4
N.D.
N.D.
+0.1
growth on ypd
YPD
-0.8
-0.0
N.D.
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.6
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.8
N.D.
N.D.
+0.0
growth on oleic acid
YNB Glucose
-0.2
-0.4
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.8
N.D.
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
N.D.
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.3
N.D.
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
-0.2
N.D.
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.2
N.D.
N.D.
-0.2
auxotrophy
YNB Glucose
+0.1
-0.3
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
+0.2
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.1
N.D.
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.0
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
+0.4
N.D.
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
-0.1
+0.6
N.D.
N.D.
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+1.4
N.D.
N.D.
+0.2
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