Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11855 and 11856 are separated by 484 nucleotides11856 and 11857 are separated by 1102 nucleotides11857 and 11858 are separated by 208 nucleotides11858 and 11859 are separated by 594 nucleotides mRNA_3487: 11855 - Hypothetical Protein, at 221,042 to 223,920 11855 mRNA_3488: 11856 - Hypothetical Protein, at 224,405 to 225,242 11856 mRNA_3489: 11857 - BLAST NADH-ubiquinone oxidoreductase, 17.2kDa subunit [..., at 226,345 to 227,373 11857 mRNA_3490: 11858 - K05236 COPA, RET1 coatomer subunit alpha, at 227,582 to 231,954 11858 mRNA_3491: 11859 - K03007 RPB10, POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5, at 232,549 to 233,056 11859
Group Condition mRNA_3487 mRNA_3488 mRNA_3489 mRNA_3490 mRNA_3491
11855 11856 11857 11858 11859
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.1 -2.1 N.D. N.D.
auxotrophy YNB Glucose -0.0 -0.3 -1.7 N.D. N.D.
growth on oleic acid YNB Glucose +0.1 -0.0 -1.5 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 -1.4 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.4 -0.5 N.D. N.D.
auxotrophy Dropout Complete -0.0 +0.0 -0.8 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.6 +0.0 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 +0.1 -0.8 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.6 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 -0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.6 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.2 -0.3 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 -0.3 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.3 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3 +0.8 N.D. N.D.
growth on ypd YPD +0.1 +0.2 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.1 +0.7 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.6 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.5 +0.7 N.D. N.D.
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