Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11856 and 11857 are separated by 1102 nucleotides11857 and 11858 are separated by 208 nucleotides11858 and 11859 are separated by 594 nucleotides11859 and 11860 are separated by 212 nucleotides mRNA_3488: 11856 - Hypothetical Protein, at 224,405 to 225,242 11856 mRNA_3489: 11857 - BLAST NADH-ubiquinone oxidoreductase, 17.2kDa subunit [..., at 226,345 to 227,373 11857 mRNA_3490: 11858 - K05236 COPA, RET1 coatomer subunit alpha, at 227,582 to 231,954 11858 mRNA_3491: 11859 - K03007 RPB10, POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5, at 232,549 to 233,056 11859 mRNA_3492: 11860 - HMMPfam-Cytidine and deoxycytidylate deaminase zinc-binding region-PF00383,SUPERFAMILY--SSF53927, at 233,269 to 234,150 11860
Group Condition mRNA_3488 mRNA_3489 mRNA_3490 mRNA_3491 mRNA_3492
11856 11857 11858 11859 11860
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -2.1 N.D. N.D. -0.3
auxotrophy YNB Glucose -0.3 -1.7 N.D. N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 N.D. N.D. -1.1
growth on oleic acid YNB Glucose -0.0 -1.5 N.D. N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -1.4 N.D. N.D. -0.1
auxotrophy Dropout Complete +0.0 -0.8 N.D. N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.3 N.D. N.D. -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.5 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.2 N.D. N.D. -0.2
growth on oleic acid YNB Oleic Acid +0.1 -0.8 N.D. N.D. +0.4
growth on ricinoleic acid YNB Glucose -0.2 -0.3 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.0 N.D. N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.4 N.D. N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.6 N.D. N.D. +0.6
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.1 N.D. N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.7 N.D. N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.8 N.D. N.D. +0.1
growth on ypd YPD +0.2 +0.1 N.D. N.D. +0.8
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.6 N.D. N.D. +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.7 N.D. N.D. +0.4
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