Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11857 and 11858 are separated by 208 nucleotides11858 and 11859 are separated by 594 nucleotides11859 and 11860 are separated by 212 nucleotides11860 and 11861 are separated by 429 nucleotides mRNA_3489: 11857 - BLAST NADH-ubiquinone oxidoreductase, 17.2kDa subunit [..., at 226,345 to 227,373 11857 mRNA_3490: 11858 - K05236 COPA, RET1 coatomer subunit alpha, at 227,582 to 231,954 11858 mRNA_3491: 11859 - K03007 RPB10, POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5, at 232,549 to 233,056 11859 mRNA_3492: 11860 - HMMPfam-Cytidine and deoxycytidylate deaminase zinc-binding region-PF00383,SUPERFAMILY--SSF53927, at 233,269 to 234,150 11860 mRNA_3493: 11861 - K06944 K06944 uncharacterized protein, at 234,580 to 236,697 11861
Group Condition mRNA_3489 mRNA_3490 mRNA_3491 mRNA_3492 mRNA_3493
11857 11858 11859 11860 11861
auxotrophy YNB Glucose -1.7 N.D. N.D. +0.0 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -1.4 N.D. N.D. -0.1 -0.5
auxotrophy Dropout Complete -0.8 N.D. N.D. -0.5 -0.6
growth on oleic acid YNB Glucose -1.5 N.D. N.D. +0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -2.1 N.D. N.D. -0.3 +0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. N.D. -1.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. N.D. -0.8 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 N.D. N.D. +0.2 -0.6
growth on oleic acid YNB Oleic Acid -0.8 N.D. N.D. +0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. N.D. -0.2 -0.6
growth on ricinoleic acid YNB Glucose -0.3 N.D. N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. N.D. +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 N.D. N.D. +0.6 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 N.D. N.D. +0.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 N.D. N.D. -0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 N.D. N.D. +0.4 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. N.D. +0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 N.D. N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 N.D. N.D. +0.4 -0.2
growth on ypd YPD +0.1 N.D. N.D. +0.8 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.6 N.D. N.D. +0.5 +0.7
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