Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11858 and 11859 are separated by 594 nucleotides
11859 and 11860 are separated by 212 nucleotides
11860 and 11861 are separated by 429 nucleotides
11861 and 11862 are separated by 638 nucleotides
mRNA_3490: 11858 - K05236 COPA, RET1 coatomer subunit alpha, at 227,582 to 231,954
11858
mRNA_3491: 11859 - K03007 RPB10, POLR2L DNA-directed RNA polymerases I, II, and III subunit RPABC5, at 232,549 to 233,056
11859
mRNA_3492: 11860 - HMMPfam-Cytidine and deoxycytidylate deaminase zinc-binding region-PF00383,SUPERFAMILY--SSF53927, at 233,269 to 234,150
11860
mRNA_3493: 11861 - K06944 K06944 uncharacterized protein, at 234,580 to 236,697
11861
mRNA_3494: 11862 - SUPERFAMILY--SSF160104, at 237,336 to 238,428
11862
Group
Condition
mRNA
_3490
mRNA
_3491
mRNA
_3492
mRNA
_3493
mRNA
_3494
11858
11859
11860
11861
11862
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.2
-0.6
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-0.8
-0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-1.1
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.2
-0.6
-0.4
auxotrophy
Dropout Complete
N.D.
N.D.
-0.5
-0.6
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.4
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.1
-0.5
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.1
-0.1
-0.6
auxotrophy
YNB Glucose
N.D.
N.D.
+0.0
-0.5
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.1
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.2
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.6
+0.0
-0.5
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.1
-0.4
+0.5
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.4
-0.3
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.3
+0.9
-0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.2
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.4
-0.2
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.4
-0.3
+0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.4
+0.2
-0.1
growth on ypd
YPD
N.D.
N.D.
+0.8
-0.1
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.5
+0.7
+0.1
remove
mRNA_3490
plot
remove
mRNA_3491
plot
remove
mRNA_3492
remove
mRNA_3493
plot
remove
mRNA_3494
plot