Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11860 and 11861 are separated by 429 nucleotides
11861 and 11862 are separated by 638 nucleotides
11862 and 11863 are separated by 264 nucleotides
11863 and 11864 are separated by 187 nucleotides
mRNA_3492: 11860 - HMMPfam-Cytidine and deoxycytidylate deaminase zinc-binding region-PF00383,SUPERFAMILY--SSF53927, at 233,269 to 234,150
11860
mRNA_3493: 11861 - K06944 K06944 uncharacterized protein, at 234,580 to 236,697
11861
mRNA_3494: 11862 - SUPERFAMILY--SSF160104, at 237,336 to 238,428
11862
mRNA_3495: 11863 - KOG4118 Uncharacterized conserved protein, at 238,693 to 239,237
11863
mRNA_3496: 11864 - KOG1198 Zinc-binding oxidoreductase, at 239,425 to 240,814
11864
Group
Condition
mRNA
_3492
mRNA
_3493
mRNA
_3494
mRNA
_3495
mRNA
_3496
11860
11861
11862
11863
11864
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.3
-0.0
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.1
-0.6
N.D.
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
-0.1
+0.1
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.6
-0.3
N.D.
+0.4
auxotrophy
Dropout Complete
-0.5
-0.6
+0.3
N.D.
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.5
+0.0
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.6
-0.4
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
+0.0
-0.5
N.D.
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
-0.2
-0.2
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
-0.2
+0.1
N.D.
-0.3
growth on ricinoleic acid
YNB Glucose
+0.1
-0.3
+0.1
N.D.
-0.0
auxotrophy
YNB Glucose
+0.0
-0.5
+0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.2
+0.2
N.D.
-0.3
growth on oleic acid
YNB Glucose
+0.1
-0.4
+0.5
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.9
-0.4
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.2
-0.1
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.3
-0.1
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-0.3
+0.1
N.D.
+0.6
growth on oleic acid
YNB Oleic Acid
+0.4
-0.3
+0.4
N.D.
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.5
+0.7
+0.1
N.D.
-0.2
growth on ypd
YPD
+0.8
-0.1
+0.3
N.D.
+0.6
remove
mRNA_3492
plot
remove
mRNA_3493
plot
remove
mRNA_3494
remove
mRNA_3495
plot
remove
mRNA_3496
plot