Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
11863 and 11864 are separated by 187 nucleotides
11864 and 11865 are separated by 249 nucleotides
11865 and 11866 are separated by 297 nucleotides
11866 and 11867 are separated by 167 nucleotides
mRNA_3495: 11863 - KOG4118 Uncharacterized conserved protein, at 238,693 to 239,237
11863
mRNA_3496: 11864 - KOG1198 Zinc-binding oxidoreductase, at 239,425 to 240,814
11864
mRNA_3497: 11865 - HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236, at 241,064 to 241,942
11865
mRNA_3498: 11866 - K18064 ACR2 arsenical-resistance protein 2, at 242,240 to 242,927
11866
mRNA_3499: 11867 - K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase, at 243,095 to 244,996
11867
Group
Condition
mRNA
_3495
mRNA
_3496
mRNA
_3497
mRNA
_3498
mRNA
_3499
11863
11864
11865
11866
11867
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.1
-0.7
-0.3
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.2
-0.8
-0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.1
-0.8
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.2
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.3
-0.4
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.3
-0.5
+0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.5
-0.3
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.4
+0.1
-0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.2
-0.0
-0.1
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
-0.0
-0.2
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.2
+0.3
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
+0.1
-0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.5
-0.4
+0.0
N.D.
growth on oleic acid
YNB Glucose
N.D.
+0.1
-0.2
+0.3
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
+0.3
-0.2
+0.2
N.D.
growth on ypd
YPD
N.D.
+0.6
-0.2
+0.2
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.6
+0.0
N.D.
auxotrophy
YNB Glucose
N.D.
+0.3
+0.2
+0.6
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.6
+0.1
+0.5
N.D.
auxotrophy
Dropout Complete
N.D.
+0.2
+0.3
+0.7
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.4
+0.3
+0.9
N.D.
remove
mRNA_3495
plot
remove
mRNA_3496
plot
remove
mRNA_3497
remove
mRNA_3498
plot
remove
mRNA_3499
plot