Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 11863 and 11864 are separated by 187 nucleotides11864 and 11865 are separated by 249 nucleotides11865 and 11866 are separated by 297 nucleotides11866 and 11867 are separated by 167 nucleotides mRNA_3495: 11863 - KOG4118 Uncharacterized conserved protein, at 238,693 to 239,237 11863 mRNA_3496: 11864 - KOG1198 Zinc-binding oxidoreductase, at 239,425 to 240,814 11864 mRNA_3497: 11865 - HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236, at 241,064 to 241,942 11865 mRNA_3498: 11866 - K18064 ACR2 arsenical-resistance protein 2, at 242,240 to 242,927 11866 mRNA_3499: 11867 - K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase, at 243,095 to 244,996 11867
Group Condition mRNA_3495 mRNA_3496 mRNA_3497 mRNA_3498 mRNA_3499
11863 11864 11865 11866 11867
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.7 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 -0.8 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.8 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 -0.2 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 -0.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 -0.5 +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 -0.3 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.4 +0.1 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 -0.0 -0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.2 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 +0.3 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.1 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.5 -0.4 +0.0 N.D.
growth on oleic acid YNB Glucose N.D. +0.1 -0.2 +0.3 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.3 -0.2 +0.2 N.D.
growth on ypd YPD N.D. +0.6 -0.2 +0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 +0.6 +0.0 N.D.
auxotrophy YNB Glucose N.D. +0.3 +0.2 +0.6 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.6 +0.1 +0.5 N.D.
auxotrophy Dropout Complete N.D. +0.2 +0.3 +0.7 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 +0.3 +0.9 N.D.
remove
mRNA_3495
plot
remove
mRNA_3496
plot
remove
mRNA_3497
remove
mRNA_3498
plot
remove
mRNA_3499
plot