Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11864 and 11865 are separated by 249 nucleotides11865 and 11866 are separated by 297 nucleotides11866 and 11867 are separated by 167 nucleotides11867 and 11868 are separated by 703 nucleotides mRNA_3496: 11864 - KOG1198 Zinc-binding oxidoreductase, at 239,425 to 240,814 11864 mRNA_3497: 11865 - HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236, at 241,064 to 241,942 11865 mRNA_3498: 11866 - K18064 ACR2 arsenical-resistance protein 2, at 242,240 to 242,927 11866 mRNA_3499: 11867 - K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase, at 243,095 to 244,996 11867 mRNA_3500: 11868 - KOG2519 5'-3' exonuclease, at 245,700 to 248,074 11868
Group Condition mRNA_3496 mRNA_3497 mRNA_3498 mRNA_3499 mRNA_3500
11864 11865 11866 11867 11868
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 -0.1 N.D. -1.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.6 +0.0 N.D. -1.9
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.8 -0.3 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.8 +0.0 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.7 -0.3 N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.1 N.D. -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.3 -0.6 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.3 -0.1 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.0 -0.2 +0.1 N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.6 +0.1 +0.5 N.D. -0.9
growth on oleic acid YNB Glucose +0.1 -0.2 +0.3 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.4 +0.0 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.3 -0.2 +0.2 N.D. +0.1
auxotrophy Dropout Complete +0.2 +0.3 +0.7 N.D. -0.6
auxotrophy YNB Glucose +0.3 +0.2 +0.6 N.D. -0.2
growth on ypd YPD +0.6 -0.2 +0.2 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.3 +0.9 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.2 -0.1 N.D. +2.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.1 -0.0 N.D. +2.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.5 +0.3 N.D. +2.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.4 +0.1 N.D. +3.0
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