Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11865 and 11866 are separated by 297 nucleotides11866 and 11867 are separated by 167 nucleotides11867 and 11868 are separated by 703 nucleotides11868 and 11869 are separated by 405 nucleotides mRNA_3497: 11865 - HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236, at 241,064 to 241,942 11865 mRNA_3498: 11866 - K18064 ACR2 arsenical-resistance protein 2, at 242,240 to 242,927 11866 mRNA_3499: 11867 - K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase, at 243,095 to 244,996 11867 mRNA_3500: 11868 - KOG2519 5'-3' exonuclease, at 245,700 to 248,074 11868 mRNA_3501: 11869 - KOG3791 Predicted RNA-binding protein involved in translational regulation, at 248,480 to 250,835 11869
Group Condition mRNA_3497 mRNA_3498 mRNA_3499 mRNA_3500 mRNA_3501
11865 11866 11867 11868 11869
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 N.D. -1.6 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.3 N.D. +0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.8 +0.0 N.D. +0.2 -0.2
auxotrophy YNB Glucose +0.2 +0.6 N.D. -0.2 -1.3
growth on oleic acid YNB Oleic Acid -0.2 +0.2 N.D. +0.1 -0.7
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.5 N.D. -0.9 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.3 N.D. +0.5 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.0 N.D. +0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 N.D. -0.5 +0.1
growth on oleic acid YNB Glucose -0.2 +0.3 N.D. +0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.0 N.D. -1.9 +1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.6 N.D. +0.2 +0.6
auxotrophy Dropout Complete +0.3 +0.7 N.D. -0.6 -0.5
growth on ricinoleic acid YNB Glucose -0.2 +0.1 N.D. +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.1 N.D. -0.2 +0.6
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.9 N.D. -0.2 -0.4
growth on ypd YPD -0.2 +0.2 N.D. +0.2 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 N.D. +2.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.0 N.D. +2.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.3 N.D. +2.7 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.1 N.D. +3.0 +0.5
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