Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11866 and 11867 are separated by 167 nucleotides11867 and 11868 are separated by 703 nucleotides11868 and 11869 are separated by 405 nucleotides11869 and 11870 are separated by 46 nucleotides mRNA_3498: 11866 - K18064 ACR2 arsenical-resistance protein 2, at 242,240 to 242,927 11866 mRNA_3499: 11867 - K00231 PPOX, hemY oxygen-dependent protoporphyrinogen oxidase, at 243,095 to 244,996 11867 mRNA_3500: 11868 - KOG2519 5'-3' exonuclease, at 245,700 to 248,074 11868 mRNA_3501: 11869 - KOG3791 Predicted RNA-binding protein involved in translational regulation, at 248,480 to 250,835 11869 mRNA_3502: 11870 - Hypothetical Protein, at 250,882 to 251,460 11870
Group Condition mRNA_3498 mRNA_3499 mRNA_3500 mRNA_3501 mRNA_3502
11866 11867 11868 11869 11870
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -1.6 +0.3 N.D.
auxotrophy YNB Glucose +0.6 N.D. -0.2 -1.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -1.9 +1.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.5 N.D. -0.9 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.5 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 N.D. +0.2 -0.4 N.D.
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.1 -0.7 N.D.
auxotrophy Dropout Complete +0.7 N.D. -0.6 -0.5 N.D.
growth on oleic acid YNB Glucose +0.3 N.D. +0.1 -0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. +0.1 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. +0.2 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. +0.2 +0.6 N.D.
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.1 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. +0.5 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.2 +0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.9 N.D. -0.2 -0.4 N.D.
growth on ypd YPD +0.2 N.D. +0.2 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. +2.5 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. +2.5 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. +2.7 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. +3.0 +0.5 N.D.
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