Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11874 and 11875 are separated by 214 nucleotides11875 and 11876 are separated by 198 nucleotides11876 and 11877 are separated by 181 nucleotides11877 and 11878 are separated by 372 nucleotides mRNA_3506: 11874 - HMMPfam-Asp/Glu/Hydantoin racemase-PF01177, at 259,634 to 260,419 11874 mRNA_3507: 11875 - K12251 aguB N-carbamoylputrescine amidase, at 260,634 to 261,961 11875 mRNA_3508: 11876 - K00273 DAO, aao D-amino-acid oxidase, at 262,160 to 263,731 11876 mRNA_3509: 11877 - K01464 DPYS, dht, hydA dihydropyrimidinase, at 263,913 to 265,913 11877 mRNA_3510: 11878 - K00889 PIP5K 1-phosphatidylinositol-4-phosphate 5-kinase, at 266,286 to 268,239 11878
Group Condition mRNA_3506 mRNA_3507 mRNA_3508 mRNA_3509 mRNA_3510
11874 11875 11876 11877 11878
ypd buoyancy 40 hrs No Buoyancy Separation -3.5 -0.2 -0.3 -0.8 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.2 -0.3 -0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.0 -0.2 -0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.3 -0.1 -0.2 -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.0 -0.1 -0.4 N.D.
growth on oleic acid YNB Glucose -0.3 -0.1 -0.0 -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.1 -0.0 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1 +0.1 +0.0 N.D.
auxotrophy YNB Glucose -0.1 +0.0 -0.1 -0.1 N.D.
auxotrophy Dropout Complete -0.3 +0.0 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.1 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 +0.1 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.2 -0.1 -0.6 N.D.
growth on ricinoleic acid YNB Glucose -0.3 +0.2 -0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 -0.1 -0.0 N.D.
growth on ypd YPD +0.4 -0.1 +0.4 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 +0.3 -0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 +0.2 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 +0.3 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.3 -0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 +0.2 -0.1 -0.2 N.D.
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