Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11875 and 11876 are separated by 198 nucleotides11876 and 11877 are separated by 181 nucleotides11877 and 11878 are separated by 372 nucleotides11878 and 11879 are separated by 2331 nucleotides mRNA_3507: 11875 - K12251 aguB N-carbamoylputrescine amidase, at 260,634 to 261,961 11875 mRNA_3508: 11876 - K00273 DAO, aao D-amino-acid oxidase, at 262,160 to 263,731 11876 mRNA_3509: 11877 - K01464 DPYS, dht, hydA dihydropyrimidinase, at 263,913 to 265,913 11877 mRNA_3510: 11878 - K00889 PIP5K 1-phosphatidylinositol-4-phosphate 5-kinase, at 266,286 to 268,239 11878 mRNA_3511: 11879 - K10875 RAD54L, RAD54 DNA repair and recombination protein RAD54 and RAD54-like protein, at 270,571 to 274,030 11879
Group Condition mRNA_3507 mRNA_3508 mRNA_3509 mRNA_3510 mRNA_3511
11875 11876 11877 11878 11879
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.3 -0.8 N.D. -1.4
growth on oleic acid YNB Oleic Acid -0.1 -0.2 -0.0 N.D. -1.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 -0.6 N.D. -1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 -0.0 N.D. -1.8
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 -0.1 N.D. -1.6
growth on oleic acid YNB Glucose -0.1 -0.0 -0.1 N.D. -1.4
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.1 -0.4 N.D. -1.1
growth on ypd YPD -0.1 +0.4 -0.5 N.D. -0.9
auxotrophy Dropout Complete +0.0 -0.1 +0.1 N.D. -1.1
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.2 -0.3 N.D. -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 -0.2 N.D. -0.8
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 -0.1 N.D. -0.8
auxotrophy YNB Glucose +0.0 -0.1 -0.1 N.D. -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 -0.5 N.D. +0.7
growth on ricinoleic acid YNB Glucose +0.2 -0.0 +0.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 -0.2 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.3 +0.3 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 -0.4 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 +0.0 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 +0.4 N.D. +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.1 +0.1 N.D. +0.7
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