Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11880 and 11881 are separated by 1646 nucleotides11881 and 11882 are separated by 210 nucleotides11882 and 11883 are separated by 425 nucleotides11883 and 11884 are separated by 236 nucleotides mRNA_3512: 11880 - K10873 RAD52 DNA repair and recombination protein RAD52, at 274,074 to 276,108 11880 mRNA_3513: 11881 - K11718 HUGT UDP-glucose-glycoprotein glucosyltransferase, at 277,755 to 283,906 11881 mRNA_3514: 11882 - K18097 GCY1 glycerol 2-dehydrogenase (NADP+), at 284,117 to 285,391 11882 mRNA_3515: 11883 - K01277 DPP3 dipeptidyl-peptidase III, at 285,817 to 288,339 11883 mRNA_3516: 11884 - K01466 allB allantoinase, at 288,576 to 290,377 11884
Group Condition mRNA_3512 mRNA_3513 mRNA_3514 mRNA_3515 mRNA_3516
11880 11881 11882 11883 11884
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 -0.1 -0.8 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.3 -0.1 -1.6 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 -0.1 +0.1 -0.7 -0.2
growth on ypd YPD +0.0 -0.1 +0.1 -0.9 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 +0.2 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.1 -0.0 -0.4 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.3 -0.0 +0.2 +0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.2 +0.2 -0.1 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 +0.5 -0.4 +0.6
growth on oleic acid YNB Glucose +0.0 +0.0 +0.6 +0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.1 +0.8 +0.1 +0.6
growth on ricinoleic acid YNB Glucose +0.0 -0.2 +0.3 -0.0 +1.0
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.7 -0.4 +0.8
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.1 +0.5 +0.0 +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.2 -0.0 +0.4 +1.1
auxotrophy YNB Glucose -0.1 -0.1 +0.3 -0.1 +1.5
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 +0.1 +0.1 +1.7
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 +0.0 +0.3 +1.0
auxotrophy Dropout Complete -0.3 -0.0 +0.3 +0.5 +1.2
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 +0.5 +0.1 +1.4
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.2 +0.1 -0.1 +1.6
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