Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11881 and 11882 are separated by 210 nucleotides11882 and 11883 are separated by 425 nucleotides11883 and 11884 are separated by 236 nucleotides11884 and 11885 are separated by 202 nucleotides mRNA_3513: 11881 - K11718 HUGT UDP-glucose-glycoprotein glucosyltransferase, at 277,755 to 283,906 11881 mRNA_3514: 11882 - K18097 GCY1 glycerol 2-dehydrogenase (NADP+), at 284,117 to 285,391 11882 mRNA_3515: 11883 - K01277 DPP3 dipeptidyl-peptidase III, at 285,817 to 288,339 11883 mRNA_3516: 11884 - K01466 allB allantoinase, at 288,576 to 290,377 11884 mRNA_3517: 11885 - K06677 YCS4, CNAP1, CAPD2 condensin complex subunit 1, at 290,580 to 295,754 11885
Group Condition mRNA_3513 mRNA_3514 mRNA_3515 mRNA_3516 mRNA_3517
11881 11882 11883 11884 11885
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 -0.8 -0.5 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.1 -1.6 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 -0.7 -0.2 N.D.
growth on ypd YPD -0.1 +0.1 -0.9 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 -0.4 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.2 -0.3 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.0 +0.2 +0.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.5 -0.4 +0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 -0.1 +0.5 N.D.
growth on oleic acid YNB Glucose +0.0 +0.6 +0.0 +0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.7 -0.4 +0.8 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.5 +0.0 +0.7 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.3 -0.0 +1.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 +0.4 +1.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.8 +0.1 +0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 +0.3 +1.0 N.D.
auxotrophy YNB Glucose -0.1 +0.3 -0.1 +1.5 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 -0.1 +1.6 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 +0.1 +1.7 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.5 +0.1 +1.4 N.D.
auxotrophy Dropout Complete -0.0 +0.3 +0.5 +1.2 N.D.
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