Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 11883 and 11884 are separated by 236 nucleotides11884 and 11885 are separated by 202 nucleotides11885 and 11886 are separated by 64 nucleotides11886 and 11887 are separated by 588 nucleotides mRNA_3515: 11883 - K01277 DPP3 dipeptidyl-peptidase III, at 285,817 to 288,339 11883 mRNA_3516: 11884 - K01466 allB allantoinase, at 288,576 to 290,377 11884 mRNA_3517: 11885 - K06677 YCS4, CNAP1, CAPD2 condensin complex subunit 1, at 290,580 to 295,754 11885 mRNA_3518: 11886 - K12275 SEC62 translocation protein SEC62, at 295,819 to 296,849 11886 mRNA_3519: 11887 - KOG4686 Predicted sugar transporter, at 297,438 to 299,524 11887
Group Condition mRNA_3515 mRNA_3516 mRNA_3517 mRNA_3518 mRNA_3519
11883 11884 11885 11886 11887
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 -0.5 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 -0.2 N.D. N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.6 +0.3 N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.0 N.D. N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 +0.6 N.D. N.D. -0.5
growth on ypd YPD -0.9 +0.5 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.2 N.D. N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.7 N.D. N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.4 +0.8 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.0 +1.0 N.D. N.D. -0.3
growth on oleic acid YNB Glucose +0.0 +0.2 N.D. N.D. +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.5 N.D. N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.6 N.D. N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.5 N.D. N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 +1.0 N.D. N.D. -0.0
auxotrophy YNB Glucose -0.1 +1.5 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +1.4 N.D. N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 +1.6 N.D. N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 +1.1 N.D. N.D. +0.3
auxotrophy Dropout Complete +0.5 +1.2 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +1.7 N.D. N.D. +0.3
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